Traffic analysis

TFome Collection

GRASSIUS will serve as a portal for access to the Grasses Transcription Factor ORFome collection, currently under development. This aspect of the project involves a very significant educational component, as part of the F.I.R.E. undergraduate education program at the University of Toledo (OH).

If you have an interest in control of gene expression in the grasses, and would like your favorite transcription factor to be included in the ORFome collection, or have antibodies that eventually you would like to use in chromatin immunoprecipitation (ChIP) experiments, we would very much like to hear from you.

Maize TF Collection

TFome Name Template cDNA
Genbank ID
Corresponding TF in GrassTFDB
ZmABI7 DY687788 GRMZM2G109480
ZmALF1 EE019154 GRMZM2G148810
ZmALF8 DV168421 GRMZM2G172001
ZmALF9 DV173552 GRMZM2G017142
ZmALF15 DV173552 AC225147.4_FG003
ZmARR1 DV033253 GRMZM2G126834
ZmBBR3 GRMZM2G164735
ZmBBR4 GRMZM2G118690
ZmbHLH5 DR785591 GRMZM2G116785
ZmbHLH164 DR829702 GRMZM2G058451
ZmbHLH166 GRMZM2G114444
ZmbZIP3 DR823629 GRMZM2G074373
ZmbZIP6 EB674186 GRMZM2G039828
ZmbZIP27 EE179215 GRMZM2G131961
ZmbZIP53 DR804364 GRMZM2G027976
ZmbZIP60 GRMZM2G444748
ZmbZIP83 EE024212 GRMZM2G000171
ZmbZIP95 EE011225 GRMZM5G858197
ZmbZIP105 DV518495 GRMZM2G056099
ZmbZIP121 DV507461 GRMZM2G112483
ZmBZR1 DR808352, DV531547 GRMZM5G812774
ZmCADR11 EB705687 GRMZM2G146286
ZmCA3P1 EE177028 GRMZM2G303465
ZmCA5P3 DT647007 GRMZM2G161680
ZmCA5P9 DR965925 GRMZM2G091433
ZmC3H1 EC905431 GRMZM2G119640
ZmDOF1 EE188777 AC155434.2_FG006
ZmEIL1 EE173988 GRMZM2G033570
ZmEIL4 GRMZM2G006752
ZmEREB2 EE177657 GRMZM2G080516
ZmEREB69 DV529833 GRMZM2G085964
ZmE2F18 GRMZM2G139024
ZmGATA2 DR807759 GRMZM2G104390
ZmGBP3 GRMZM2G041818
ZmGLK24 EC899342 GRMZM2G060485
ZmGLK48 EE295362 GRMZM5G887276
ZmGRAS21 GRMZM2G116638
ZmGRF4 DT941769 GRMZM2G018414
ZmHB25 GRMZM2G178102
ZmHB74 DR804210 GRMZM2G087741
ZmHB79 DR801947 GRMZM2G370332
ZmHSF3 DV174324 GRMZM2G005815
ZmMADS1 GRMZM2G171365
ZmMADS9 DV518441 GRMZM2G005155
ZmMADS72 DV535460 GRMZM2G370777
ZmMYBR2 DV531704 GRMZM2G400489
ZmMYBR3 GRMZM2G002128
ZmMYB6 EB817690 GRMZM2G047626
ZmMYB8 AM156905 GRMZM2G041415
ZmMYB9 AM156904 GRMZM2G081557
ZmMYB22 EE039390 GRMZM2G096358
ZmMYB26 EB637416 GRMZM2G170049
ZmMYB27 EE177923 GRMZM2G064744
ZmMYB31 EB640531 GRMZM2G050305
ZmMYB36 EB402539 GRMZM2G169316
ZmMYB39 AM156907 GRMZM2G127857
ZmMYB40 EC905796 GRMZM2G051256
ZmMYB42 AM156908 GRMZM2G419239
ZmMYB44 DR793321 GRMZM2G111731
ZmMYB50 DR785526 GRMZM2G145444
ZmMYB91 EB167101 GRMZM2G119693
ZmMYB95 N/A GRMZM2G051528
ZmMYB132 DR814848 AC206901.3_FG005
ZmMYB138 EE152517 GRMZM2G139688
ZmMYB149 GRMZM2G127490
ZmMYB152 DR785666 GRMZM2G104551
ZmMYB153 EB705747 GRMZM2G050550
ZmMYB154 EC886470 GRMZM2G022686
ZmNAC2 EE175365 GRMZM2G181605
ZmNAC3 DR787066 GRMZM2G147867
ZmNAC4 DT652174 GRMZM2G079632
ZmNAC6 DR955211 GRMZM2G018553
ZmNAC7 EC900052 GRMZM2G163251
ZmNAC109 DV535526 GRMZM2G014653
ZmNAC110 EE292199 GRMZM2G167018
ZmNAC133 EE177571 GRMZM2G094067
ZmNLP1 DR962345 AC233880.1_FG006
ZmNLP2 DY687705 GRMZM2G057131
ZmOrphan43 DT643534 GRMZM2G134671
ZmOrphan48 DV169657 GRMZM2G170034
ZmOrphan90 DR826352 GRMZM2G020081
ZmOrphan121 EB701836 GRMZM2G149132
ZmOrphan149 GRMZM2G116475
ZmOrphan153 DR828861 GRMZM5G834596
ZmOrphan208 DV515091 GRMZM2G095727
ZmOrphan296 DV508136 GRMZM2G060798
ZmPHD14 DV538261 GRMZM2G178072
ZmSBP2 DR964939 GRMZM2G307588
ZmSBP3 EE295622 GRMZM2G106798
ZmSBP21 DR821052 GRMZM2G148467
ZmSBP31 GRMZM2G156621
ZmTCP3 GRMZM2G110242
ZmTHX1 DV540768 GRMZM2G157219
ZmTHX2 DT943786 GRMZM2G392168
ZmTHX3 DR821424 GRMZM5G850092
ZmTUB1 DV507382 GRMZM2G068586
ZmVOZ2 GRMZM2G158717
ZmWHIRLY2 EE039788 GRMZM2G012262
ZmWRKY2 DR808860 GRMZM2G048450
ZmWRKY34 GRMZM2G057116
ZmWRKY50 GRMZM2G071907
ZmWRKY98 DT939730 GRMZM2G377217
ZmWRKY107 GRMZM2G018487
ZmWRKY125 GRMZM2G163054
ZmYAB1 DV538465 GRMZM2G054795
ZmYAB2 DV512085 GRMZM2G088309
ZmZIM12 GRMZM2G101769
ZmZIM13 GRMZM2G005954

Rice TF Collection

TFome Name Template cDNA
Genbank ID
Corresponding TF in GrassTFDB
OsWRKY73 NM_001067180 LOC_Os07g48260
OsWRKY36 NM_001057758 LOC_Os03g53050
OsCA5P20 NM_001074587 LOC_Os11g34200
OsbHLH3 NM_001048340 LOC_Os01g02110
OsWRKY71 NM_001066651 LOC_Os07g39480
OsEREB145 NM_001069548 LOC_Os09g20350
OsHSF24 LOC_Os09g28354
OsWRKY11 NM_001050163 LOC_Os01g43650
OsMYBR70 LOC_Os08g39980
OsbZIP33 LOC_Os03g58250
OsbHLH66 NM_001058140 LOC_Os03g58830
OsbHLH24 NM_001051807 LOC_Os01g70310
OsbHLH148 NM_001057756 LOC_Os03g53020
OsWRKY44 NM_001059999 LOC_Os04g46060
OsWRKY3 NM_001048778 LOC_Os01g09100
OsE2F2 LOC_Os02g33430
OsbHLH45 NM_001055424 LOC_Os03g04310
OsMYB2 NM_001048527 LOC_Os01g04930
OsEREB133 NP_001061917 LOC_Os08g34360
OsCOL11 NM_001063976.1 LOC_Os06g19444
OsbHLH114 NM_001068612 LOC_Os08g37730
OsPHD45 NM_001067318 LOC_Os08g01420
OsbHLH110 NM_001068405 LOC_Os08g04390
OsOrphan49 LOC_Os04g45690
OsMYB108 NM_001070331 LOC_Os09g36730
OsbZIP63 NM_001067230.1 LOC_Os07g48820
OsC3H2 NM_001048811 LOC_Os01g09620
OsbHLH58 NM_001057406 LOC_Os03g46860
OsABI33 LOC_Os05g40280
OsbHLH47 NM_001055752 LOC_Os03g08930
OsbHLH116 NM_001068644 LOC_Os08g38210
OsbHLH22 NM_001051641 LOC_Os01g67480
OsbHLH65 NM_001058098 LOC_Os03g58330
OsbHLH7 NM_001048828.1 LOC_Os01g09990
OsbHLH97 NM_001063915 LOC_Os06g16400
OsDOF5 NM_001050835 LOC_Os01g55340
OsOrphan19 NM_001053911 LOC_Os02g39360
OsMYB64 NP_001054597 LOC_Os05g04820
OsWRKY62 NM_001062907 LOC_Os05g49620
OsWRKY49 NM_001061359 LOC_Os05g09020
OsbZIP42 NM_001062428 LOC_Os05g41070
OsARID1 NM_001053364 LOC_Os02g27060
OsZIM7 NM_001068384.1 LOC_Os08g33160
OsCA5P14 NM_001066450 LOC_Os07g36140
OsbHLH82 NM_001060925 LOC_Os05g01256
OsEIL7 NM_001067213 LOC_Os07g48630
OsbHLH31 NM_001053265 LOC_Os02g23823
OsbHLH118 NM_001068824 LOC_Os08g41320
OsMYB92 NM_001067235 LOC_Os07g48870
OsEREB70 NM_001060021.1 LOC_Os04g46400
OsEREB117 NM_001064791 LOC_Os06g44750
OsWRKY79 NM_001068242 LOC_Os08g29660
OsWRKY12 NM_001050594 LOC_Os01g51690
OsSBP4 NM_001052581 LOC_Os02g07780
OsNAC53 LOC_Os05g37080
OsbHLH126 NM_001069990.1 LOC_Os09g29830
NM_001054333 LOC_Os02g46610
OsWRKY94 NM_001074460 LOC_Os11g29870
OsbHLH26 NM_001052215 LOC_Os02g02480
OsbZIP38 NM_001061079.1 LOC_Os05g03860
OsWRKY42 LOC_Os04g21950